PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022937671.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GeBP

Protein Properties

Length: 387aa MW: 43777.4 Da PI: 4.5275

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022937671.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	84.7	1.2e-26	120	216	5	97
DUF573 5 rlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 +w++eDei lL+G+++f++++ +++d afy+++k +i++ k+ql++K+rrL++K++ ++k++ g++p+f++ h++++f++s+ki XP_022937671.1 120 TVWTNEDEIQLLRGFLEFASENRIfphrLQQQDAAAFYRKIKPKIQLCCGKNQLLDKLRRLRRKYQITSSKIDCGEKPAFKSLHERSTFDISRKI 214 68*****************99967655567************************************************************* PP DUF573 96 Wg 97 Wg XP_022937671.1 215 WG 216 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MTWPLSGWIF SSSSSSSMEE DQNSQPSDEH GVSDDEPGTP LNEEDEEFQA DSYREDAQNN 60 GENAAVSDGV SDETDAADLR QSKTNSFSPI DDRIPSVIAI PANVPNNIVT VAVPPRRRVT 120 VWTNEDEIQL LRGFLEFASE NRIFPHRLQQ QDAAAFYRKI KPKIQLCCGK NQLLDKLRRL 180 RRKYQITSSK IDCGEKPAFK SLHERSTFDI SRKIWGRNSG KKQTSVEDSI LDEVLADINP 240 NFIEIQVKTE NLEEDESEER EDYQQLTKRR RMAYLSGEAS NSNEIPARTN SIVDDIGKIS 300 GLVEEVARGC LSPLFKELIS NGWPPVGLAG RIPSCGGGEA GEERWRKQQE LEMEVYLKRL 360 ELVQEEIRVS LEQLRSKEES KNNDNNG

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MTWPLSGWIF SSSSSSSMEE DQNSQPSDEH GVSDDEPGTP LNEEDEEFQA DSYREDAQNN  60
GENAAVSDGV SDETDAADLR QSKTNSFSPI DDRIPSVIAI PANVPNNIVT VAVPPRRRVT  120
VWTNEDEIQL LRGFLEFASE NRIFPHRLQQ QDAAAFYRKI KPKIQLCCGK NQLLDKLRRL  180
RRKYQITSSK IDCGEKPAFK SLHERSTFDI SRKIWGRNSG KKQTSVEDSI LDEVLADINP  240
NFIEIQVKTE NLEEDESEER EDYQQLTKRR RMAYLSGEAS NSNEIPARTN SIVDDIGKIS  300
GLVEEVARGC LSPLFKELIS NGWPPVGLAG RIPSCGGGEA GEERWRKQQE LEMEVYLKRL  360
ELVQEEIRVS LEQLRSKEES KNNDNNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	3e-33	GeBP family protein