PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022937614.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 327aa MW: 36817.6 Da PI: 5.2992

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022937614.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26	1.6e-08	250	283	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++ee+ +L+ +gL+++q+ +WF N+R + XP_022937614.1 250 KWPYPTEEEKSKLSGITGLDQKQINNWFINQRKR 283 569*****************************88 PP
2	ELK	32.4	2e-11	204	225	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK++Ll+KYsgyL+sLk+ F+ XP_022937614.1 204 DLKEMLLKKYSGYLSSLKKDFL 225 6********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MEEFYRLNSS VISAYTNGVV ASEAIASTSS GGVHGAQMMN NEMIQLEAES TTGLNMSEII 60 KTQIVNHPLY CKLVSAYIEC QKVGAPPQVA CLLEEIGREN HPPRSCIVLG ADPQLDNFME 120 SYCGVLHQYK NELTKPFDEA TMFLTNIELE LSNLCKGSFT ATSDSRPATN DEVAETPEDE 180 PSSYREVEMP GNHEPFGTRQ TNQDLKEMLL KKYSGYLSSL KKDFLKKRKK EKLPKDARMA 240 LFDWWNTHYK WPYPTEEEKS KLSGITGLDQ KQINNWFINQ RKRHWNPPEE MRFALMDSVG 300 TGVGVGVGEC IKGSKFYDNG ETGGRVV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	229	LKKDFLKKRK
2	226	230	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	2e-74	TALE family protein