PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022937473.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 395aa    MW: 43489.6 Da    PI: 7.3783
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022937473.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.77.1e-07148168526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C +f++ G C  Gd C FaHg
  XP_022937473.1 148 ACADFRK-GNCTKGDACEFAHG 168
                     799****.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MMIDEQPNRP NQKLHVPPWT FMEDPASDGY SHSPGSGGSG SGSGSGVKCD GCSTGDGYSP  60
FYLQEALAML QQYLPSKEAE VESDLDASGR EADSPVDTYS SDQFRMYEFK IKKCLRGRSH  120
DWTECPFAHP GEKARRRDPR KYYYSGTACA DFRKGNCTKG DACEFAHGVF ECWLHPARYR  180
TQPCKDGTSC RRRVCFFAHT PEQLRILPQQ SPRSTSSIPS YDGSPLRQAI EACAKQMPYL  240
SSSGTSTPVS PRIESPPQSP MFRSLNRPHA TSSINEMVAS LRSLQLHKEL GKVQSPSSLW  300
NVQVGSPVFG SPGESSARSG FSSLPDTPTP PAVRYLDFWD LGCGEEQAMA RVESGRDLRA  360
KMLEKLRKEN SVACGDQEKP GGGSVDVGWI SELLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-111C3H family protein