PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022937463.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 948aa MW: 106371 Da PI: 9.1294

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022937463.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.6	6.1e-08	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 rW+t E e++++a +++G + Wk++a+ gR+ +++ XP_022937463.1 46 RWSTREIEIFYEAYRKYGQD-WKKVASSTY-GRSIEMV 81 9***************99.***9998.9988776 PP

Sequence ? help Back to Top
Protein Sequence Length: 948 aa Download sequence
MAPPKKSTSR NKRILHSNNP SAEKSYTSSQ RSKKRKKNLC EKLGPRWSTR EIEIFYEAYR 60 KYGQDWKKVA SSTYGRSIEM VEALYNMNRA YLSLPEGTAS VVGLIAPMTD YYNVMEGRDS 120 ERDNYHASGF QESPKTNQGK VQMSFSNEDY CTSHSVAANG GCLSLLRSLY NGSQPRVVQK 180 RTPRVPISYS NKRNEWKNHA SGNESSKKSE FHVSSDEVAH GATLALAEAS QRGGTSTTSM 240 PCKIKENLKS SYEVSGGRKG RPIEQFSYDP SLMVDIESAR TVKAHHKMKK RYRKEKVLDD 300 KDRQFHQSVD YLTENRPEAP IMDGVGSLSV PEGKVDSEIS NADCELSFPL VQKKKSRKQS 360 RGDGNIAVDA LQTLADLSSV MPITAMEPAS VQIVEETDSF NLENKSCIED KAKQVMVPET 420 LNIEDTGYGK SKPGSGLSIV IPDTKIPVDA HLPENLKTAT SGHIKPMNNE NQVTLPIKQG 480 SRSRCKMGLR RLLTHQKTKP CDDKLEKELM KYSPSVQDRA FFLKDKLSNC MSSTLVRRWC 540 TFEWFYSAID YPWFARREFV EYLNHVGLKN IPRLTRLEWS VIRSSLGKPR RLSEFFLHGE 600 RMKLKLFRES TRKIYADLRA GSREGLPTDL ARPLTVGQRV IALLPNTLKV LDGMVLTVNH 660 DKYRIQFDNQ EIGVELVMDF DCMPFNPRDN LPVALRCQSR STNKPPLACK EPKANSHPNL 720 SRELEKASSP YTIDTLVPCT TFNLAQHNTF PGNSLPLWSM APSLANTRAP SSIPHSLNVS 780 HELGCGVVDI VRGSREKAQL MVNVAIEVML STSQGDDPLT IICGALHSFE SFEYQKPLSK 840 SQEYINDSLG PFNQLCSLEH LSTSDLISPR SRRSDKDYGG IPSNLITSCV ATLLMIQACV 900 EYPYPPGDVA QILGLAVKSL HPRCSQNLHF YKEIETCIGR ICSNLNSI

Sequence ? help Back to Top

Protein Sequence Length: 948 aa Download sequence

MAPPKKSTSR NKRILHSNNP SAEKSYTSSQ RSKKRKKNLC EKLGPRWSTR EIEIFYEAYR  60
KYGQDWKKVA SSTYGRSIEM VEALYNMNRA YLSLPEGTAS VVGLIAPMTD YYNVMEGRDS  120
ERDNYHASGF QESPKTNQGK VQMSFSNEDY CTSHSVAANG GCLSLLRSLY NGSQPRVVQK  180
RTPRVPISYS NKRNEWKNHA SGNESSKKSE FHVSSDEVAH GATLALAEAS QRGGTSTTSM  240
PCKIKENLKS SYEVSGGRKG RPIEQFSYDP SLMVDIESAR TVKAHHKMKK RYRKEKVLDD  300
KDRQFHQSVD YLTENRPEAP IMDGVGSLSV PEGKVDSEIS NADCELSFPL VQKKKSRKQS  360
RGDGNIAVDA LQTLADLSSV MPITAMEPAS VQIVEETDSF NLENKSCIED KAKQVMVPET  420
LNIEDTGYGK SKPGSGLSIV IPDTKIPVDA HLPENLKTAT SGHIKPMNNE NQVTLPIKQG  480
SRSRCKMGLR RLLTHQKTKP CDDKLEKELM KYSPSVQDRA FFLKDKLSNC MSSTLVRRWC  540
TFEWFYSAID YPWFARREFV EYLNHVGLKN IPRLTRLEWS VIRSSLGKPR RLSEFFLHGE  600
RMKLKLFRES TRKIYADLRA GSREGLPTDL ARPLTVGQRV IALLPNTLKV LDGMVLTVNH  660
DKYRIQFDNQ EIGVELVMDF DCMPFNPRDN LPVALRCQSR STNKPPLACK EPKANSHPNL  720
SRELEKASSP YTIDTLVPCT TFNLAQHNTF PGNSLPLWSM APSLANTRAP SSIPHSLNVS  780
HELGCGVVDI VRGSREKAQL MVNVAIEVML STSQGDDPLT IICGALHSFE SFEYQKPLSK  840
SQEYINDSLG PFNQLCSLEH LSTSDLISPR SRRSDKDYGG IPSNLITSCV ATLLMIQACV  900
EYPYPPGDVA QILGLAVKSL HPRCSQNLHF YKEIETCIGR ICSNLNSI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	37	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	1e-132	MYB_related family protein