PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022937430.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 323aa    MW: 35500.9 Da    PI: 6.0715
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022937430.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.4e-1752100355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +gr++AeIrdp++   + r++lg+f+ta eAa a+++a+++++g
  XP_022937430.1  52 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAALAYDRAALSMKG 100
                     56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MATSKASDKA YPIYETAQSQ MGFALIQRNS SPISQSGGER RGRRKQAEPG RFLGVRRRPW  60
GRYAAEIRDP TTKERHWLGT FDTAHEAALA YDRAALSMKG TQARTNFIYS DTSTFHSILS  120
AFDVQTLLPN SDTHSPVLHQ AQSQPSIPQT SSNHHVSAND HDTNFFFSND SNSGYLSCIV  180
PDNCLKPPSD STHKTQLKNS HRSIESNDHL QKFSFFGSNS IDTLPFEGLD VSAMTYGSVV  240
NEPNCCNDGV WEKQQIWESN GDELSAIINS SSSSSSSSAM VGEDEAFHPF MNSSYGGLLP  300
QSSTCCPSVP PFGDAFDFGY PLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.12e-66ERF family protein