PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022937345.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 842aa MW: 92611.9 Da PI: 5.6833 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58 | 1.6e-18 | 22 | 80 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+l++++++ps +r++L +++ +++ +q+kvWFqNrR +ek+ XP_022937345.1 22 KYVRYTPEQVEALERLYYECPKPSSMRRQQLIRECpilsDIEPKQIKVWFQNRRCREKQ 80 5679*****************************************************97 PP | |||||||
2 | START | 177.7 | 6.8e-56 | 166 | 373 | 2 | 204 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 +aee+++e+++ka+ ++ Wv+++ +++g++++ +++ s++++g a+ra+g+v +++ v+e+l+d + W ++++++++l+v+s+g g+++l XP_022937345.1 166 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDWPSWFRDCRAVDVLNVLSTGngGTIELL 259 7899******************************************************.9999999999************************** PP EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS START 95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185 +++l+a+++l+p Rdf+ +Ry+ l++g++v++++S++++q+ p+ +++vRae+l Sg+li+p+++g+s +++v+h+dl+ ++++++lr+l+ XP_022937345.1 260 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSmppVQNFVRAEMLSSGYLIRPCEGGGSIIHMVDHMDLEPWSVPEVLRPLY 354 *******************************************9988899********************************************* PP HHHHHHHHHHHHHHTXXXX CS START 186 ksglaegaktwvatlqrqc 204 ks++ ++k+++a+l+ ++ XP_022937345.1 355 KSSTLLAQKNTMAALRLLR 373 ***************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 842 aa Download sequence |
MMAVTSACKD SATKISSLDN GKYVRYTPEQ VEALERLYYE CPKPSSMRRQ QLIRECPILS 60 DIEPKQIKVW FQNRRCREKQ RKEASRLQTV NRKLTAMNRL LMEENDRLQK QVSQLVYENS 120 YFRQQTQNAT LATTDTSCES VVTSGQQNLT PPHPPKDASP AGLLSIAEET LAEFLSKATG 180 TAVEWVQMPG MKPGPDSIGI VAISHGCTGV AARACGLVGL EPTRVAEILK DWPSWFRDCR 240 AVDVLNVLST GNGGTIELLY MQLYAPTTLA PARDFWLLRY TSVLEDGSLV VCERSLNNTQ 300 NGPSMPPVQN FVRAEMLSSG YLIRPCEGGG SIIHMVDHMD LEPWSVPEVL RPLYKSSTLL 360 AQKNTMAALR LLRQISQEVS QPNVTGWGRR PAALRSLSQK LSRGFNEAVN GFTDEGWSLL 420 ENDGIDDVTL LVNMSHGKTM MGANMSYSNG FPSMSNAVLC AKASMLLQNV TPAMLIRFLR 480 EHRSEWADSS IDAYSAAAIK TGQCGLPGSH AGTFGGQIIL PLAQTVEHEE FMEVVKFENV 540 SHYSDDKLMP GDIFLLQLCN GVDENTVGTS AELIFAPIDA SFSDDAPILP SGFRIIPLDS 600 GMDASSPYRT LDLASALDVG PAGNRASGDC AGQSGKSKSV MTIAFQFVFD VHLQDNVAAM 660 ARQYVRSIIA SVQRVALALS PSNFGPHANL QTPAGAPEAQ TLALWISQSY RCFMGMELLK 720 NEGRESVLKS LWHHSDAVMC CSLQALPNFT FANQSGLDML ETTLVALQDI TLEKIFDDNG 780 KKTLASEFPR IMQQGFICLQ GGICLSSMGR AISYEKAVAW KVLNEEENAH CICFMFMNWS 840 FV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32880.1 | 0.0 | HD-ZIP family protein |