PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022937343.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRAS | ||||||||
Protein Properties | Length: 577aa MW: 64496.4 Da PI: 5.1259 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 420.5 | 1.4e-128 | 207 | 576 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l+elL++cA+a+++ +e ++l++ + +s g+p+qRl ay++e+L ar +s+ ++y+al+++e + s++ l+++++++e++P+lkf++ XP_022937343.1 207 LKELLIACAKALAEYRMEDFDKLVTAARGAVSIGGEPIQRLGAYMVEGLVARKEDSGANIYRALNCREPA---SDDLLSYMHMLYEICPYLKFGY 298 5799*****************************************************************9...99******************** PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 ++aN aI ea +e+r+HiiDf+isqG+QW++LlqaLa+Rp+g+p++RiTg+++p s+ + + le +++rLa++ ++ g+++ef+ + + XP_022937343.1 299 MAANGAIAEACRNEDRIHIIDFQISQGTQWLTLLQALAARPSGAPHVRITGIDDPVSKyaRGDGLEVVESRLAEISRKYGIKVEFHG-IPVFAPN 392 *******************************************************999999**************************.5778899 PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 ++ ++L+++pgEalaVn+ lqlh+++desv+++++rd +L+lvkslsPkvv++veqe+++n+++F++rf+e+l+yy a+f+s++++lpr++++ri XP_022937343.1 393 ITRDMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRLVKSLSPKVVTLVEQESNTNTTPFFNRFVETLDYYLAIFESIDVTLPRDNKKRI 487 99********************************************************************************************* PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 +vE+++l+++ivnv+aceg+er+erhe ++kW++rl++aGF++ pls+++++ +++llr ++ + y++ e++g+++lgW++r+L+s+SaW XP_022937343.1 488 NVEQHCLAKDIVNVIACEGREREERHELFGKWKSRLTMAGFRQFPLSSYVNSVIRSLLRCYS-EHYTLVEKDGAMLLGWRNRNLISASAW 576 **********************************************************9999.66************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 577 aa Download sequence |
MDSHQLFGFG VNSAEFSYTS SYSSVPSLPN SLLGPVNFNL RNSPVSSSLF SSQFESDSFT 60 TTTVSDSQDQ RNSPDDLSGL SPSCNSSFET SSFNRIASSY LGSNAFVYEG CSTEDISYAL 120 KQLESALMEP DNEEVVNKPD ESSRPQMMGQ RPYSWSQDRC GGSSYVVQSQ TSPVSRSQRS 180 EEVRLGKRQK SMDEPMLQQD GLPSDNLKEL LIACAKALAE YRMEDFDKLV TAARGAVSIG 240 GEPIQRLGAY MVEGLVARKE DSGANIYRAL NCREPASDDL LSYMHMLYEI CPYLKFGYMA 300 ANGAIAEACR NEDRIHIIDF QISQGTQWLT LLQALAARPS GAPHVRITGI DDPVSKYARG 360 DGLEVVESRL AEISRKYGIK VEFHGIPVFA PNITRDMLDI RPGEALAVNF PLQLHHTPDE 420 SVDVNNPRDG LLRLVKSLSP KVVTLVEQES NTNTTPFFNR FVETLDYYLA IFESIDVTLP 480 RDNKKRINVE QHCLAKDIVN VIACEGRERE ERHELFGKWK SRLTMAGFRQ FPLSSYVNSV 540 IRSLLRCYSE HYTLVEKDGA MLLGWRNRNL ISASAWN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50600.1 | 1e-165 | GRAS family protein |