PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022937287.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 415aa MW: 47574.6 Da PI: 7.9155 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.8 | 8.4e-05 | 160 | 183 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C+ Cg+ ++++ +Lk+H + H XP_022937287.1 160 YVCGVCGRKCKTNLDLKKHFKQlH 183 9******************98766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 415 aa Download sequence |
MNSTTFVCNP MDALPLLPSS QLLFPNNAIN FRHRISIRVK PTSQGSCRWR IRATAENGAS 60 SASTSQIDMV RNREGVFTAK QSKVVVLWDL DNKPPRGPPY EAAMALKRVA QRFGQVVDMS 120 AYANRHAFIH LPQWVVEERR ERRQLDILER KGLFTPSESY VCGVCGRKCK TNLDLKKHFK 180 QLHERERQKK LNRMRSLKGK KRQRYKEKFV SGNHKYNEAA RSLITPKVGY GLASELRRAG 240 VFVKTVEDKP QAADWALKRQ MQHSMSRGID WMFLVSDDSD FSEMLRKAKE ANLGTVVVGD 300 RDRALGRHAD LWVPWMGVEN GDVTEEDLVP KRWRTRRTQE DFDEDDGFSV SRYYGEAESG 360 SDLESVVQEL ASASTELNGF RISAFSEGED DDEWVEDEVA SDYLLEMSDE EDGYF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 139 | 180 | RRERRQLDILERKGLFTPSESYVCGVCGRKCKTNLDLKKHFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52010.1 | 1e-163 | C2H2 family protein |