PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022936966.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 230aa MW: 24817.8 Da PI: 7.7585

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022936966.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.2	0.00056	80	102	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H XP_022936966.1 80 YQCKTCDRCFPSFQALGGHRASH 102 9***********99999998887 PP
2	zf-C2H2	14.2	0.00013	144	166	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_022936966.1 144 HECSICGAEFSSGQALGGHMRRH 166 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MAETPDENQA QFIKGKRTKR TRPPSVASSS SADCSSSSAG LTEQEEEDQD LANCLILLAQ 60 GRTGDCASVL VQHNQSLFAY QCKTCDRCFP SFQALGGHRA SHKKPKISNS LQTHDPQFHL 120 SLQLSTGRPP ASFAAGDLVK SKVHECSICG AEFSSGQALG GHMRRHRALT STASVPSRGA 180 AATPQLQELM IKKERNVLEL DLNLPAPEDD RHRTAVSVFS AASSLVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	1e-43	C2H2 family protein