PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022936655.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 574aa    MW: 64649.1 Da    PI: 9.3307
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022936655.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.15.8e-1723108899
                     -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     s++l+s rl lp kf++  +++  +   +tl  +sg++W v+l   ++ +  ++ +GW  F++++ L+ gDf+vF++dg+  f  +v++f++
  XP_022936655.1  23 SSTLSSERLKLPSKFIRYLEEIIVR--SVTLIGPSGQTWLVNL--LQQNDDLFFCDGWPTFARDHALDCGDFLVFRYDGELHF--TVQIFDE 108
                     789999**********666666555..5***************..8888899999**********************996666..9999986 PP
2B349.57.8e-16220312398
                     EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                      ++++ +v  s  l +p +f  +h   + ++ +l+l +++g+sW+v+    ++   +++l +GW  Fv+ n+++ gD++vF+l+++ e   +v++
  XP_022936655.1 220 RIMKSFNVRGSYTLNIPYQFSMAHL--PSCKLKLVLHNLKGESWTVNSVPtTRVNTSHTLCGGWMAFVRGNDVNMGDICVFELVRHCEL--RVHI 310
                     55666667777889******98995..458889**************955555556699************************985555..9999 PP

                     E- CS
              B3  97 fr 98 
                     fr
  XP_022936655.1 311 FR 312
                     98 PP
3B346.75.7e-15454542596
                     -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +++ +++ s  l +p +f ++h  +  + ++++l  ++g +W v+    + ++ ++++ +GW +Fv++ng++  D+++F+l+g+ e   +v++
  XP_022936655.1 454 MKKFNTSGSYTLKIPHQFSSAHFPN--SRTEIILHGPNGGRWIVNSVPdSMGRMMHTFCGGWMSFVRDNGIQMEDICIFELIGKCEL--LVHI 542
                     5455556667799*********744..5679***************6545555559999***********************95444..6665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    
MMGTESRREM VTARRPCFYT FYSSTLSSER LKLPSKFIRY LEEIIVRSVT LIGPSGQTWL  60
VNLLQQNDDL FFCDGWPTFA RDHALDCGDF LVFRYDGELH FTVQIFDEST CEKEGAFHSQ  120
CSQDNTGHKR DREEDNSSPQ TCAEAVAKKM RSIFDVHSEC RENLAAIRTV EVHKNGTGPN  180
GISKVDDVTT QDKILALSLS FQDEKNVSES FSSNFPYFVR IMKSFNVRGS YTLNIPYQFS  240
MAHLPSCKLK LVLHNLKGES WTVNSVPTTR VNTSHTLCGG WMAFVRGNDV NMGDICVFEL  300
VRHCELRVHI FRVGKEISED QSGKGTLNRL GAGHAVIPRK ALKGLPKKMN GNSLKVHSKR  360
SKRIEIHDKK CLNSWQEPFC NDARKHSSAK KVSTKVMVCS QSKKPSKRLV NRRTSVKGDL  420
VLPARLGLRA MVARDEERAA KSFVSVFPSF VRIMKKFNTS GSYTLKIPHQ FSSAHFPNSR  480
TEIILHGPNG GRWIVNSVPD SMGRMMHTFC GGWMSFVRDN GIQMEDICIF ELIGKCELLV  540
HITGVGKKGF DLSSEVTTCS ELAIVPTTSN DPSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-20B3 family protein