PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022936548.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 190aa    MW: 21297.1 Da    PI: 9.3369
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022936548.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.1e-19655255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr++  +g+Wv+eIr+p        +r++lg+f+tae+Aa+a+++a+  ++g
  XP_022936548.1  6 KFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFDTAEDAARAYDQAAILMNG 55
                    89****999.**********8.....334**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MVYSRKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFDTAE DAARAYDQAA ILMNGQNAKT  60
NFPASKDQSA EASHGHGSSP MTPKALSELL STKLRKCCKN PSPSLTCLRL DSDNAHIGVW  120
QKRAGTRATS NWVMRIELGK KEIPSPLPSP ESTSQEPDGH RNGIDEEDRI AMQMIEELLN  180
WNCPLPSISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25390.24e-72ERF family protein