PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022936257.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 280aa MW: 30866.8 Da PI: 5.5834 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 83.3 | 4.9e-26 | 16 | 156 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee.......vikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknra 77 lppG+ F+P+de+++++yL +k++++ + ik++d ++++P dLp+ ++++k+wy++s + +++ r + XP_022936257.1 16 LPPGCCFSPSDEQILCFYLPNKTTASIspnslA---NgvspgynLIKDLDPFDYDPFDLPEsacfsyGSRGRKKHWYYYSVSVFSEE---RGRIR 104 79********************88877554440...255556548**************955777654445778******9987654...44445 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 +ksgyW+ + + +ev+ ++g + g+k+++vfy g + ++++kt+W+m ey+l XP_022936257.1 105 MKSGYWRRKRRAREVIIHRGVVLGMKTSFVFYWGnSIENAVKTNWIMYEYAL 156 789*****************************774778999*********87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MEVLQPFQPA SSSSCLPPGC CFSPSDEQIL CFYLPNKTTA SISPNSLANG VSPGYNLIKD 60 LDPFDYDPFD LPESACFSYG SRGRKKHWYY YSVSVFSEER GRIRMKSGYW RRKRRAREVI 120 IHRGVVLGMK TSFVFYWGNS IENAVKTNWI MYEYALGDHF KASFVLHRVF VRGWGHGISG 180 NGLSAYGDGS VSAVCHNGNQ QDGIPVTNGI AGHEMGCAEK PNCVLVTDPV TTLQVPSEAY 240 PCGMMAPSPV TPTGSISILD GDFLEINDLD DQMDPEDISG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.1 | 7e-14 | NAC family protein |