PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022935923.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | TALE | ||||||||
Protein Properties | Length: 468aa MW: 52116.7 Da PI: 6.5349 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 22.8 | 1.5e-07 | 406 | 439 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_022935923.1 406 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 439 469*****************************87 PP | |||||||
2 | ELK | 22 | 4e-08 | 360 | 381 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+ +Y+++++++++E++ XP_022935923.1 360 ELKHELKSGYKEKIVDIREEIL 381 9*******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 468 aa Download sequence |
MAYHNHLSQD LPLHFSDHQQ HHQNQPLSDT SLRTILPDQL AGGHSSPDPK SHHHHHHHPL 60 QTAPNWLNNA LLRNQNPHSH YSTDTVTTAA AAAAANTNFL NLHTTASDST VSHSSNQWLS 120 RPILHRNHSD VIDDVTASAG DAMIGAATAA LSHDSGEMKN DANSGDGMNK SEGMVMEPSA 180 GGEGVLNWHN ARYKAEILTH PLYEQLLSAH VACLRIATPV DQLPRIDAQL AQSQNVVAKY 240 SALTHTAPPP MVGDDKELDQ FMTHYVLLLC SFKEQLQQHV RVHAMEAVMA CWDIEQSLQS 300 LTGVSPGEGT GATMSDDEDD QVDSDANLFD GSLEGPDTMG FGPLIPTESE RSLMERVRQE 360 LKHELKSGYK EKIVDIREEI LRKRRAGKLP GDTTSVLKQW WQSHSKWPYP TEEDKARLVQ 420 ETGLQLKQIN NWFINQRKRN WHNNPSSSTN LKSKRKSNAG ENSSDRFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25220.1 | 0.0 | TALE family protein |