PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935922.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 469aa MW: 52272.9 Da PI: 6.5898

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935922.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.8	1.5e-07	406	439	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_022935922.1 406 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 439 469*****************************87 PP
2	ELK	21.9	4e-08	360	381	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+ +Y+++++++++E++ XP_022935922.1 360 ELKHELKSGYKEKIVDIREEIL 381 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MAYHNHLSQD LPLHFSDHQQ HHQNQPLSDT SLRTILPDQL AGGHSSPDPK SHHHHHHHPL 60 QTAPNWLNNA LLRNQNPHSH YSTDTVTTAA AAAAANTNFL NLHTTASDST VSHSSNQWLS 120 RPILHRNHSD VIDDVTASAG DAMIGAATAA LSHDSGEMKN DANSGDGMNK SEGMVMEPSA 180 GGEGVLNWHN ARYKAEILTH PLYEQLLSAH VACLRIATPV DQLPRIDAQL AQSQNVVAKY 240 SALTHTAPPP MVGDDKELDQ FMTHYVLLLC SFKEQLQQHV RVHAMEAVMA CWDIEQSLQS 300 LTGVSPGEGT GATMSDDEDD QVDSDANLFD GSLEGPDTMG FGPLIPTESE RSLMERVRQE 360 LKHELKSGYK EKIVDIREEI LRKRRAGKLP GDTTSVLKQW WQSHSKWPYP TEEDKARLVQ 420 ETGLQLKQIN NWFINQRKRN WHNNPSSSTN LKSKRKRSNA GENSSDRFK

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MAYHNHLSQD LPLHFSDHQQ HHQNQPLSDT SLRTILPDQL AGGHSSPDPK SHHHHHHHPL  60
QTAPNWLNNA LLRNQNPHSH YSTDTVTTAA AAAAANTNFL NLHTTASDST VSHSSNQWLS  120
RPILHRNHSD VIDDVTASAG DAMIGAATAA LSHDSGEMKN DANSGDGMNK SEGMVMEPSA  180
GGEGVLNWHN ARYKAEILTH PLYEQLLSAH VACLRIATPV DQLPRIDAQL AQSQNVVAKY  240
SALTHTAPPP MVGDDKELDQ FMTHYVLLLC SFKEQLQQHV RVHAMEAVMA CWDIEQSLQS  300
LTGVSPGEGT GATMSDDEDD QVDSDANLFD GSLEGPDTMG FGPLIPTESE RSLMERVRQE  360
LKHELKSGYK EKIVDIREEI LRKRRAGKLP GDTTSVLKQW WQSHSKWPYP TEEDKARLVQ  420
ETGLQLKQIN NWFINQRKRN WHNNPSSSTN LKSKRKRSNA GENSSDRFK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	437	457	RKRNWHNNPSSSTNLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	0.0	TALE family protein