PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935800.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 374aa MW: 42702.8 Da PI: 6.6978

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935800.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.2e-09	301	336	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_022935800.1 301 YKWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 336 5679*****************************885 PP
2	ELK	37.9	3.9e-13	256	277	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sLkqE+s XP_022935800.1 256 ELKNHLLRKYSGYLSSLKQELS 277 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MEEYNNHVNE NSNPRGNFLY PSGVVGGNSS SGNFGRSSNP TAQMGLNSFH LQQGTDCFQT 60 DHSHPIVKTE ASSSHHQLHK FHHPLLRGGG GGQPPPPPTT CRPDQHGLLD VEAIKAKILA 120 HPQYSSLLEA YMECQKVGAP PQVVERLVAA RHEFETRQRS SMVSGETIKD PELDQFMEAY 180 YDMLVKYREE LTRPIQEAMD FMRRVESQLS SLCNGPLRIF NSDEKCEGMG SSEEEQENSG 240 GETELPEIDP RAEDRELKNH LLRKYSGYLS SLKQELSKKK KKGKLPKDAR QKLLNWWELH 300 YKWPYPSETE KVALAESTGL DQKQINNWFI NQRKRHWKPS EDMQFMVMDG LHPPNTALYI 360 DGHYMTDAHY RLGP

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MEEYNNHVNE NSNPRGNFLY PSGVVGGNSS SGNFGRSSNP TAQMGLNSFH LQQGTDCFQT  60
DHSHPIVKTE ASSSHHQLHK FHHPLLRGGG GGQPPPPPTT CRPDQHGLLD VEAIKAKILA  120
HPQYSSLLEA YMECQKVGAP PQVVERLVAA RHEFETRQRS SMVSGETIKD PELDQFMEAY  180
YDMLVKYREE LTRPIQEAMD FMRRVESQLS SLCNGPLRIF NSDEKCEGMG SSEEEQENSG  240
GETELPEIDP RAEDRELKNH LLRKYSGYLS SLKQELSKKK KKGKLPKDAR QKLLNWWELH  300
YKWPYPSETE KVALAESTGL DQKQINNWFI NQRKRHWKPS EDMQFMVMDG LHPPNTALYI  360
DGHYMTDAHY RLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-128	TALE family protein