PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935736.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 441aa MW: 48511.4 Da PI: 6.4437

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935736.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.2	3.1e-34	43	149	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg......... 88 g+kdrhsk++T++g RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++akpai++l +++ +++ +++++ + ++++++++ XP_022935736.1 43 GRKDRHSKVCTAKGTRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKPAIDKLRELPGWNPNVVDTNTGKLATHEEKNSeykipvanh 137 89*************************************************************66666556444444444433322344444433 PP TCP 89 ...........k 89 + XP_022935736.1 138 ppegsitrnsnR 149 333333333220 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MGEFWNQRPG KSPKPEVRSR GGGGGGVSDV VEVQGGRIVR SIGRKDRHSK VCTAKGTRDR 60 RVRLSAHTAI EFYDVQDRLG YDRPSKAVDW LIKKAKPAID KLRELPGWNP NVVDTNTGKL 120 ATHEEKNSEY KIPVANHPPE GSITRNSNRR ANFVFGDGGI SECTMQNLEK TSTEENPNSD 180 NSCFLPPSFN SDSIVDSFKS FLPMTTTAAA ETPSSIFEFD TFPPDLQSRT SSRSQDLRLS 240 LQSLKAPNSN LESEGTQHPI PQNHQNDQSF FSGTTSLYGF DEWSEQQPQS AMEINRFQRI 300 MHRNTVSADH SSGGYGGDAG AGGENGEFLY NSQVTTSNFP PASPYLQPLF GENQLVSQRG 360 PLQSSYTPSI RAWIDPSIAF VDNQQQHVTP QSMNPSSFPG LGFAYGGFSR FLIPALIPGE 420 EEQHDGMSEK PSSASSNSRH C

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MGEFWNQRPG KSPKPEVRSR GGGGGGVSDV VEVQGGRIVR SIGRKDRHSK VCTAKGTRDR  60
RVRLSAHTAI EFYDVQDRLG YDRPSKAVDW LIKKAKPAID KLRELPGWNP NVVDTNTGKL  120
ATHEEKNSEY KIPVANHPPE GSITRNSNRR ANFVFGDGGI SECTMQNLEK TSTEENPNSD  180
NSCFLPPSFN SDSIVDSFKS FLPMTTTAAA ETPSSIFEFD TFPPDLQSRT SSRSQDLRLS  240
LQSLKAPNSN LESEGTQHPI PQNHQNDQSF FSGTTSLYGF DEWSEQQPQS AMEINRFQRI  300
MHRNTVSADH SSGGYGGDAG AGGENGEFLY NSQVTTSNFP PASPYLQPLF GENQLVSQRG  360
PLQSSYTPSI RAWIDPSIAF VDNQQQHVTP QSMNPSSFPG LGFAYGGFSR FLIPALIPGE  420
EEQHDGMSEK PSSASSNSRH C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-70	TCP family protein