PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022935423.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 706aa    MW: 76995.2 Da    PI: 6.4566
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022935423.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH215.8e-07277297526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G C++Gd C +aHg
  XP_022935423.1 277 TCPDFRK-GACRRGDMCEYAHG 297
                     6******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 706 aa     Download sequence    
MNSLTVETED AFSSLLELAA NDDVDAFKRS IERDLSGIDE IGFWYGRLRG SKQMTNEQRT  60
PLMVAATYGS IEVLKLILSL SCADVNRAVG LDRSTALHCA ASGGAANAVD VVKLLLAAGA  120
DPNMVDGNGH RPVDVVVAPL RHAELKSTLT ELLKTNGFSG DGNLDALTGA RNSLSPRPSS  180
PLNAPSFTSE LVSSPTKSKL SDFSMYPASE KKEYPVDLSL PDIKNSIYST DEFRMYSFKV  240
RPCSRAYSHD WTECPFVHPG ENARRRDPRK FHYSCVTCPD FRKGACRRGD MCEYAHGVFE  300
CWLHPAQYRT RLCKDGTNCS RRVCFFAHTT EELRPLYVST GSAVPSPRSC TSGASAMDYT  360
TVMNLLPGSP SSVPVMSPSP FTPPMSPSAN GMSHPSVAWP QPNVPALLLP GSNIQSSRLR  420
SSLSARDIPV EDFDYLSDFE LQQQQQQLVN DLNCLSQPPL SSNSLSRSGR LKTMTPSNLD  480
DLFSAESSSP RYSDQALASA VFSPTHKSAV INQFQQQQNM LSPINTNFSP KNVDHPLLQA  540
SFGVPSSGRM SPRNLEPPIS PVGSRLSMLA QREKQQQFRS LSSRELGANS ASIVGSPASS  600
WSKWGPSNGR PDWAVNADEM GKLRRSSSFE LGNNGEEPDL SWVQSLVKES PTEIKEKQAH  660
PNLGGDSFVS SGESSNVNSQ MESVDHAALG AWLEQMQLDH LVALQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41900.10.0C3H family protein