PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935359.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Dof

Protein Properties

Length: 419aa MW: 45369.7 Da PI: 6.496

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935359.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.8	1.2e-38	99	158	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+++cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvP+G+grr+nk+ XP_022935359.1 99 PDKIIPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRRNKQL 158 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MTSSTTDDVA AAPHFKDLAI KLFGRTIPLK ESQISAAPRV NRDACNNWKQ AEQSVLGAED 60 SCRSERSSVL VGDNEEHRAS KEEQMDGNGT DQERAFKKPD KIIPCPRCNS LETKFCYFNN 120 YNVNQPRHFC KNCQRYWTAG GTMRNVPIGA GRRRNKQLAS QYRQIIVSSE GVAATTRLET 180 SGVESTGNGT VLKFGSEAAP LCESMETVLS LGDQKRSIEI GCGDSPEEPS SCGSSMTTTS 240 IRRNELPNSS TEIAGSNTVH CYPVPQLVFP LNQGGNGVIP SAMAQSSDTT SSHPNPVQWL 300 PATMLAVPGF CGPSLPLQFV PASYWGCTPV WTTGSSDVCA SQTSPATISR CQTSSSPTLG 360 KHSRDADSLT EEEKPEKCIV IPKTLRVDNP SEASRSPMWT TLEAPNILEA KNGSFYSLL

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MTSSTTDDVA AAPHFKDLAI KLFGRTIPLK ESQISAAPRV NRDACNNWKQ AEQSVLGAED  60
SCRSERSSVL VGDNEEHRAS KEEQMDGNGT DQERAFKKPD KIIPCPRCNS LETKFCYFNN  120
YNVNQPRHFC KNCQRYWTAG GTMRNVPIGA GRRRNKQLAS QYRQIIVSSE GVAATTRLET  180
SGVESTGNGT VLKFGSEAAP LCESMETVLS LGDQKRSIEI GCGDSPEEPS SCGSSMTTTS  240
IRRNELPNSS TEIAGSNTVH CYPVPQLVFP LNQGGNGVIP SAMAQSSDTT SSHPNPVQWL  300
PATMLAVPGF CGPSLPLQFV PASYWGCTPV WTTGSSDVCA SQTSPATISR CQTSSSPTLG  360
KHSRDADSLT EEEKPEKCIV IPKTLRVDNP SEASRSPMWT TLEAPNILEA KNGSFYSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	5e-63	Dof family protein