PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022935269.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 249aa    MW: 27396 Da    PI: 6.6676
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022935269.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.0003391113123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_022935269.1  91 FSCNYCQRKFFSSQALGGHQNAH 113
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MKPFLDLQKE PSCLANDSDI SSQVGSIHCG SRTPPSPSPS AQPGFESVCL DLTLNFNIVE  60
DIGTRPDSTR FSLSSTSDQS SNEPTAVPRV FSCNYCQRKF FSSQALGGHQ NAHKRERTMA  120
KRAMRMGILA ERYASLASLP LKGSSFKSLG IKAHSSLLHG MTAPMMPIDI RSSARFEPEP  180
GYIGMPIFLE DDEADVMWPG SFRPMVETRN TRELTQPSFR LTDLSSISSV EKTSIQDVEN  240
STPDLTLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.19e-43C2H2 family protein