PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935263.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 352aa MW: 39131.4 Da PI: 6.6915

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935263.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.9	1.9e-40	70	146	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dl+++keyhrrh+vC+ hsk+pvv+v+g+e+rfCqqCsrfh l efDe krsCr+rL++hn+rrrk+q+ XP_022935263.1 70 CLVDGCDSDLKNCKEYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHPLGEFDEVKRSCRKRLDGHNRRRRKPQP 146 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MDWGWGTLSG KPTFREKNHT PPPPTSFSDS IGSSNNNEEP ILEGSSQESS SSNGSSKRTR 60 ILQGTQNQSC LVDGCDSDLK NCKEYHRRHR VCDSHSKTPV VMVRGEEKRF CQQCSRFHPL 120 GEFDEVKRSC RKRLDGHNRR RRKPQPESLF MSSRDFLSNC KGPIVLQFSN QQIHVPDEHG 180 RSLWSMRPEE TSMVPPNSSA YFSYGGGGGD NEELPFFLHK NGTRQGKQMV SSRLCFNQQL 240 PDAISQGSEV GSMKQAVPTN TSPVDSGCAL YLLSSHPDAG LSSLVQSHLS LPVQTPETEL 300 HFSSLSDFSA SFGSKDKPVC ETNLDNGLEL EMEASDGLFQ SEAPHKFPIS WE

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MDWGWGTLSG KPTFREKNHT PPPPTSFSDS IGSSNNNEEP ILEGSSQESS SSNGSSKRTR  60
ILQGTQNQSC LVDGCDSDLK NCKEYHRRHR VCDSHSKTPV VMVRGEEKRF CQQCSRFHPL  120
GEFDEVKRSC RKRLDGHNRR RRKPQPESLF MSSRDFLSNC KGPIVLQFSN QQIHVPDEHG  180
RSLWSMRPEE TSMVPPNSSA YFSYGGGGGD NEELPFFLHK NGTRQGKQMV SSRLCFNQQL  240
PDAISQGSEV GSMKQAVPTN TSPVDSGCAL YLLSSHPDAG LSSLVQSHLS LPVQTPETEL  300
HFSSLSDFSA SFGSKDKPVC ETNLDNGLEL EMEASDGLFQ SEAPHKFPIS WE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	144	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	3e-44	SBP family protein