PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935165.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 433aa MW: 47056.2 Da PI: 7.7983

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935165.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	81.7	6.5e-26	165	209	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e+ XP_022935165.1 165 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVET 209 79****************************************996 PP
2	QLQ	42.3	2.2e-15	93	128	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +F+ aQ ++L+ Q+l+++y++a++ vPpeLl +i+k XP_022935165.1 93 YFSVAQRHELELQALIFRYMLAGAAVPPELLHPIKK 128 79********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MDFDLKKCRR QAESEEEEEV EEPQHSAKIC KFFVEQPHRL QQQQQQQPSS CSSVLPLFVP 60 GSINDSKASN MLSAFPDSTS SSSSHRLPRM LGYFSVAQRH ELELQALIFR YMLAGAAVPP 120 ELLHPIKKSL LSSTAPFFLH HPLQHFPHYP TSLLQAGYWG RAAMDPEPGR CRRTDGKKWR 180 CSRDVVAGQK YCERHMHRGR NRSRKPVETT TTKPTSTTTT AAAVSSGGCS LCSNANRVVG 240 GGGGRPFLTV ESGNYSCVCG QTPSVDLLHL NQGASSDSLS ENKNFYESHK EASAGDGKSD 300 GHILRHFFDD WPRSENGGCG SDNSNASQRM NPTSLSISVA GNPPSSSSDV SLKLSTGGGS 360 DQGSGDPHLH QNGHIDGEHM HLNWAAGWAA TQMASMGGPL AEALRSANKN SLPTTVLHQL 420 QRTTNSEATF IST

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MDFDLKKCRR QAESEEEEEV EEPQHSAKIC KFFVEQPHRL QQQQQQQPSS CSSVLPLFVP  60
GSINDSKASN MLSAFPDSTS SSSSHRLPRM LGYFSVAQRH ELELQALIFR YMLAGAAVPP  120
ELLHPIKKSL LSSTAPFFLH HPLQHFPHYP TSLLQAGYWG RAAMDPEPGR CRRTDGKKWR  180
CSRDVVAGQK YCERHMHRGR NRSRKPVETT TTKPTSTTTT AAAVSSGGCS LCSNANRVVG  240
GGGGRPFLTV ESGNYSCVCG QTPSVDLLHL NQGASSDSLS ENKNFYESHK EASAGDGKSD  300
GHILRHFFDD WPRSENGGCG SDNSNASQRM NPTSLSISVA GNPPSSSSDV SLKLSTGGGS  360
DQGSGDPHLH QNGHIDGEHM HLNWAAGWAA TQMASMGGPL AEALRSANKN SLPTTVLHQL  420
QRTTNSEATF IST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	9e-60	GRF family protein