PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022934929.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 425aa MW: 47757.8 Da PI: 7.2297

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022934929.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.4	1.4e-09	283	315	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yps +++ LAk++gL+ +qV++WF N R + XP_022934929.1 283 HPYPSDTDKLMLAKQTGLSRSQVSNWFINARVR 315 89*****************************88 PP
2	BELL	75.1	1.1e-24	163	231	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 l + k+ L+s+l+eV+++Ykqy+ q++ v+ sFe + glg+a+pY++ A ka+ +hF++Lk+ i +q+ XP_022934929.1 163 SLASNKSTLVSMLDEVYRKYKQYYLQIEEVMTSFEYISGLGNAAPYANQAIKAMYKHFQSLKNVILDQL 231 567899***********************************************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MADGIESFDH VPQQSRRDKL REQPDRSSFL PFYDPSLISS SDILSAAAAA NNPLFQFHHP 60 FFDTQIPSSL LPDSNNSVLL NHCYAAFKPE PLSLSLSSHP YLSTVNVPLG PFTGYASILK 120 GSRFLKPAQQ LLEELCDVVG LQRTQSSSAT SGSLSDCGVV HHSLASNKST LVSMLDEVYR 180 KYKQYYLQIE EVMTSFEYIS GLGNAAPYAN QAIKAMYKHF QSLKNVILDQ LKFNKRIHGG 240 DYSQRSVRNP GFLDHQPVWR PQRGLPEQAV TVLRGWLFDH FLHPYPSDTD KLMLAKQTGL 300 SRSQVSNWFI NARVRLWKPL VEEIYNLETK QTQKNCHREE DRNEHPPSRN EPHDVPMGIQ 360 DEPFNICYNL SSHPHMASNN HNGGVSLTLG LHQNNGIGGF PVGYVMGGHF GRDVVGTQLL 420 HDFVG

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MADGIESFDH VPQQSRRDKL REQPDRSSFL PFYDPSLISS SDILSAAAAA NNPLFQFHHP  60
FFDTQIPSSL LPDSNNSVLL NHCYAAFKPE PLSLSLSSHP YLSTVNVPLG PFTGYASILK  120
GSRFLKPAQQ LLEELCDVVG LQRTQSSSAT SGSLSDCGVV HHSLASNKST LVSMLDEVYR  180
KYKQYYLQIE EVMTSFEYIS GLGNAAPYAN QAIKAMYKHF QSLKNVILDQ LKFNKRIHGG  240
DYSQRSVRNP GFLDHQPVWR PQRGLPEQAV TVLRGWLFDH FLHPYPSDTD KLMLAKQTGL  300
SRSQVSNWFI NARVRLWKPL VEEIYNLETK QTQKNCHREE DRNEHPPSRN EPHDVPMGIQ  360
DEPFNICYNL SSHPHMASNN HNGGVSLTLG LHQNNGIGGF PVGYVMGGHF GRDVVGTQLL  420
HDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	5e-88	TALE family protein