PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022934659.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 353aa MW: 40156.5 Da PI: 7.1678

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022934659.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	173	192	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_022934659.1 173 FSCPVCFKTFNRYNNMQMHM 192 89*****************9 PP
2	zf-C2H2	14.5	0.0001	257	279	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ XP_022934659.1 257 FMCRKCGKAFAVRGDWRTHEKNC 279 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MDDPSTNFFT NLFKFNPSPP NPHPPPPPPP PYFLPTHPHA PPSSPPLRQA LPLLRLSPTR 60 SSQNNNPQQN FSSSSSSSSA TAAANVSVTV ALHIGLPSPS ASEMATLLLS SNQNQEEEDE 120 DEDDEEHEEH ELEEEEEEEV AAISGLCLSN SRLNKGQYWI PTPSQILIGP TQFSCPVCFK 180 TFNRYNNMQM HMWGHGSQYR RGPESLRGTQ PTGMLRLPCY CCSPGCRNNI DHPRAKPLKD 240 FRTLQTHYKR KHGIKPFMCR KCGKAFAVRG DWRTHEKNCG KLWYCICGSD FKHKRSLKDH 300 IKAFGNGHAA YNNSNANNNP DHRHRHHHHC HHRHHRFDEE EDPAYSEVEQ DHD

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MDDPSTNFFT NLFKFNPSPP NPHPPPPPPP PYFLPTHPHA PPSSPPLRQA LPLLRLSPTR  60
SSQNNNPQQN FSSSSSSSSA TAAANVSVTV ALHIGLPSPS ASEMATLLLS SNQNQEEEDE  120
DEDDEEHEEH ELEEEEEEEV AAISGLCLSN SRLNKGQYWI PTPSQILIGP TQFSCPVCFK  180
TFNRYNNMQM HMWGHGSQYR RGPESLRGTQ PTGMLRLPCY CCSPGCRNNI DHPRAKPLKD  240
FRTLQTHYKR KHGIKPFMCR KCGKAFAVRG DWRTHEKNCG KLWYCICGSD FKHKRSLKDH  300
IKAFGNGHAA YNNSNANNNP DHRHRHHHHC HHRHHRFDEE EDPAYSEVEQ DHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-122	C2H2 family protein