PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022934612.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 23333.3 Da PI: 6.7939 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.5 | 7.9e-14 | 38 | 87 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ykGVr++ +g+Wv+e+r p n k+ +f++g+f t+e+Aa a++ ++ ++ge XP_022934612.1 38 IYKGVRQR--NGKWVSELRWP--N-KNSTFWVGTFCTPEMAAVAYDVVALTIKGE 87 69***975..6******6665..3.37*********************9999886 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 210 aa Download sequence |
MPSSSSSSTN EHLPPSQKTA STKRKAGRKK FQETRHPIYK GVRQRNGKWV SELRWPNKNS 60 TFWVGTFCTP EMAAVAYDVV ALTIKGESAP LNFPNWTHLF PRVKSSSSSI NDIRTMAVEA 120 AEAFTSSNRL SSLSSSSLCS SLTSEEKVIP AVLTDRLVLD EEEVFNMPAI IAGMAEGLIL 180 TPPGMKRGFN WEEYEDTVEL SLWNDDGEKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G25470.1 | 2e-41 | ERF family protein |