PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022934598.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 225aa MW: 24587.8 Da PI: 9.8285

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022934598.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00051	49	71	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C++ Fs+ L H++ H XP_022934598.1 49 FYCKFCSRKFSNLQALGGHQNAH 71 79*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MACSGECEGS EVELNLKHSF KVLKAEPGFE EAGTAMGTET RTKRETRVFY CKFCSRKFSN 60 LQALGGHQNA HKRERDIAKR EKAVAAAAAA MSFRTTTAAA AAATTTGAFD SIGSFYHPYY 120 SAMAIHALRN KALGFPIRPP IRKPTRPQAV AHGCRWWPRE QYMAAAQQLH FGGLWQAANN 180 GGRENLATTE LESIAMASRN ATSSSSQIFG ADQYNIHGLD LTLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01860.1	1e-12	C2H2 family protein