PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022934583.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 287aa    MW: 32636.5 Da    PI: 8.4325
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022934583.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP120.51.9e-37841922134
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaak 96 
                     +gkkdrhski+T++g+RdRRvRls+++a++fFdLqd+LG+dk+skt+eWL+ ++ +aikel +++  +                         ++
  XP_022934583.1  84 TGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKYGNV------------------------EE 154
                     79**************************************************************33333........................12 PP

             TCP  97 skksqksaasalnlakesrakarararertrekmrikn 134
                     +++++++ + ++ lakesrakararare ++++ + ++
  XP_022934583.1 155 KEEDSEKVEVFNLLAKESRAKARARAREDDNDNDNDND 192
                     3344455555788899************6666555443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MASSSFNLNP FPCFPLAFPS LLNPDPSPNN PTFNFHQPHL DPLSFLPPYF PIAHFSASAT  60
GNSIQALGDI PSALTVGMGT GTRTGKKDRH SKIYTAQGLR DRRVRLSIDI ARKFFDLQDM  120
LGYDKASKTL EWLFGKSRKA IKELSRSKYG NVEEKEEDSE KVEVFNLLAK ESRAKARARA  180
REDDNDNDND NDNDKKYYGH RMSRVEEVSD HWSTQTSNLS MEEYSFTNKR RICATKFIGD  240
NDNDNMKPCR DDDAEASKGY LQEHSMIKRK WKASSIDGIP SYPFSKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.21e-28TCP family protein