PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022934375.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family AP2
Protein Properties Length: 434aa    MW: 47585.1 Da    PI: 8.3277
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022934375.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544.1e-1775134155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV++++++gr++A+++d  ++n+   k+ k+++lg ++ +e Aa+a++ a++k++g
  XP_022934375.1  75 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDEEEAAARAYDLAALKYWG 134
                     57*******************766644468557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MASSSSDPGF KHEPGSCSAA AAVAGGGAAE SSEVVMANDQ LLLYRGLKKA KKERGCTAKE  60
RISKMPPCAA GKRSSIYRGV TRHRWTGRYE AHLWDKSTWN QNQNKKGKQV YLGAYDEEEA  120
AARAYDLAAL KYWGPGTLIN FPVTDYSRDL EEMQNVSREE YLASLRRKSS GFSRGISKYR  180
GLSSRWDPSF SRVPGPEYIN SINYGAGDDQ ATEGEFVPGF CIEKKIDLTS HIKWWGPNKT  240
RTASAGSKSS EEDKHSSCAG EVGSELKALG QTTRPTEPYE MPCLGTLHDV KKTTSRVSAL  300
SILSRSAAYK SLQEKALKLQ EINNENDENE NKNTVNKIDH GKVVETHTSH GGDPSERYGV  360
AFGTSGGLPL QRNMFPLTSF LTAPLLSSYN TVDPLGDPIH WTSLVSVLPT GLSRAAEVTK  420
TETSSTYTLF QPEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-162AP2 family protein