PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022934230.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 264aa    MW: 29309.3 Da    PI: 10.5102
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022934230.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.13e-1663108147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg W + Ed +l+++v+ +G+ +W++Ia+ +  gR++k+c++rw++ 
   XP_022934230.1  63 RGHWRPAEDAKLKELVAHYGPQNWNLIAENLR-GRSGKSCRLRWFNQ 108
                      899*****************************.***********996 PP
2Myb_DNA-binding54.23.2e-17117158346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      ++ +eE+e+lv a++++G++ W+ Iar ++ gRt++ +k++w+ 
   XP_022934230.1 117 AFNEEEEERLVTAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 158
                      799*****************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MNLPPFNHAF PGNGLLQNPA LMPPPPPPPP LPLPLPPPLP CTDGTAIVTK NNAPHRHTKL  60
CARGHWRPAE DAKLKELVAH YGPQNWNLIA ENLRGRSGKS CRLRWFNQLD PRINRAAFNE  120
EEEERLVTAH RLYGNKWAMI ARLFPGRTDN AVKNHWHVIM ARKQRRSLRK IFQKNNVSGE  180
STISSTASTS AASRWCGGIG KVWGKTEEAM TAEQSGNSES NSDVSAAESV ISTNLCLSSG  240
WGNGRRRQDH MKMEFIDFLG VGAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17800.13e-61MYB family protein