PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022934008.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 270aa    MW: 29362.7 Da    PI: 9.7204
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022934008.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.11.7e-12116160347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG g+W+ I+r   + Rt+ q+ s+ qky
   XP_022934008.1 116 PWTEEEHRIFLIGLEKLGRGDWRGISRNYVTSRTPTQVASHAQKY 160
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MGRKCSHCGN IGHNSRTCTN FIPSTPNLVG SNGIIRLFGV HLDASSSSSS SSFPIKKSFS  60
TDCLPSSSPS PSSSSSFSSS TRVHLDHNSL EETRSSNGYL SDGLLTREQE RKKGVPWTEE  120
EHRIFLIGLE KLGRGDWRGI SRNYVTSRTP TQVASHAQKY FLRQSTANKK NRRSSLFDTV  180
GAANDSTTTN SKNIELSLKN PTRSSCMEVM KNNEEQQLLG ASSSSSPSSV WVYDDLELTL  240
GAPRAPKLEL EQPKKAPPPG SLLVGPISVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.11e-58MYB_related family protein