PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022933832.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 383aa    MW: 42431.6 Da    PI: 6.7174
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022933832.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.83.8e-08141161526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G Ck G++C FaHg
  XP_022933832.1 141 ACPDFRK-GSCKKGESCEFAHG 161
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MVIGQRHRPG PLLHITPLTI PEEPANQTRL PFPLSGISVS SDDNANGGDY SPYHLQEVLA  60
AFQRYLPSTS ESEIESNLEL SGRESDVPVD AYSCDQFRIF EFKVRKCTRG RSHDWTECPF  120
AHPGEKARRR DPRKYHYSGT ACPDFRKGSC KKGESCEFAH GVFECWLHPS RYRTQPCKDG  180
INCRRRVCFF AHTPEQLRVL PQQSPRDANS PDSYEESPLR QCLDGTCAKS LPFLSSPVSV  240
SPSATPVDSP PISPMTRSLA RSLGSSSVNE IVASLHMHLS KVNSLPSSWN VQIGSPGYPS  300
RIRPGFCSLP TTPTQPPTGP GVGLLDFTNR GFVEEPAMER VESGRELRAK MLQKLSEENS  360
LDLADSGPSD CTPDVEWVSD LVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-100C3H family protein