PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022933825.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 460aa MW: 51060.9 Da PI: 7.2268 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 115.2 | 6.9e-36 | 53 | 195 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv++k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_022933825.1 53 LPAGVKFDPTDQELI-EHLEAKVKAKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVSRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 145 799************.99*********5553334444434666646**********.555666799******************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022933825.1 146 ETRWHKTGKTRPVMA-SGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 195 778************.9999**********5547999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 460 aa Download sequence |
MRNSQIGSIV GGGSDSLLDA KLEQHQMCGS KHCPGCGHKL EGRPRVYQDW VGLPAGVKFD 60 PTDQELIEHL EAKVKAKDMK SHPLIDEFIP TIEGEDGICY THPEKLPGVS RDGLSRHFFH 120 RPSKAYTTGT RKRRKIQTEC DLQGGETRWH KTGKTRPVMA SGKQKGCKKI LVLYTNFGKN 180 RKPEKTNWVM HQYHLGQHEE EKEGELVVSK IFYQTQPRQC NWSDRSLAAA ETGFEVVASG 240 SSCSSMAQAD EMSPAGGGVG ASISSFSSLD IQHLKSDHFG FGPFRTTSFD EVGMKGRTSG 300 GACSSSGEFE LRDHHHQLVV AHNDRHRSIV HHHLPTTGFH ISNHPSHQIS AIISPPPPPP 360 LLLLDHDSFH HPSPIIIQNQ QFHQQQQQQQ EEGESEHHKM GGRSASGLEE LIMGCTSSSS 420 SSIKHHPPES SISSSREADE WMKYSSFWPE SDNPNLHGHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-138 | NAC family protein |