PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022933726.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HB-PHD
Protein Properties Length: 721aa    MW: 81627.5 Da    PI: 9.33
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022933726.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox33.38e-115085501254
                     HHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  12 leeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     +e L ++F++n  ps+e +e L+ +lgL+ ++V+ WF+N R+ 
  XP_022933726.1 508 VEKLRQVFAENELPSREVKENLSIELGLDAEKVSKWFKNARYS 550
                     789**************************************85 PP

2PHD35.71.9e-12239294151
                     SBTTTSS..TCTTSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS
             PHD   1 rCkvCgk..sdeegelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCkek 51 
                     +C+ C+   +  +++++lCd +C+ +fH+kCl+++l++e++p g   w+C+ C++k
  XP_022933726.1 239 FCAKCKLreAFPDNDIILCDgTCNCAFHQKCLDPPLDTENIPPGdqGWFCKFCECK 294
                     699999854455********56********************9999*******985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 721 aa     Download sequence    
MKGTGRRLTQ KESGKCSHSK METGSELILP LKLKRCSKIS HSKQKKSRTK SHAQEIGSTL  60
KRRPFPKSLS KGNKNVTIRQ LAGKKFLLKK LNSKYTKDLL LSKLQGGKSL PSSSTEGNAE  120
KVEPVTKINQ QRKRRKNKGK REKVELDEAS RLQRRTRYLI IKMKLEQNLI DAYSGEGWKG  180
QSREKIRPEK ELQRAMKQIL QCKLGIRDAI RQLDLLGSVG CIEDSVIGPD GSVYHEHIFC  240
AKCKLREAFP DNDIILCDGT CNCAFHQKCL DPPLDTENIP PGDQGWFCKF CECKMEILEG  300
MNAHLGTRFS MNVSWEDIFK EEAAFPDGRN ASLNHEEDWP SDDSADDDYD PDKNEIGYDN  360
LSGEENDKDV FEESSSSTSL SWSLDGEDLT DRDGIGCEDH FGASSSIVSD GSNEEGITGG  420
RRQRQAVDYK KLYVEMFGKD STAHEQVSED EDWGPAKRRR REKECDAAST LMSLCESEKK  480
SPKIDVEAEK RPLNSQSRSF FRIPLYAVEK LRQVFAENEL PSREVKENLS IELGLDAEKV  540
SKWFKNARYS ALRTRKAEGA TQSHSPNKTL NDPRLAADSK EMSACPPSSE DAPIKELQLK  600
SRNTHYKKKQ HRKSSLVSSN NNKDALDSGD DISLKNLLKN RKTKVKKRVK FVARGGGRGR  660
GRGQEAEVEM ERLCKIKGRL EIMKQKLLRL SNEKEDGVLD RSHMFEQSII YVPVAVLKEK  720
V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14551KKSRTKS
2135142RKNKGKRE
3457483KRRRREKECDAASTLMSLCESEKKSPK
4458463RRRREK
5640647NRKTKVKK
6654663RGGGRGRGRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29940.11e-158HB-PHD family protein