PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933549.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Dof

Protein Properties

Length: 461aa MW: 50192.3 Da PI: 6.1263

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933549.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125	2.4e-39	117	177	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+s XP_022933549.1 117 PDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTEGGTIRNVPVGAGRRKNKNSA 177 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MLEMKDSAIR IFGKKIPLPA DFEAPLMQSD DLDSSSEKEN RDGAVEKDAV VGKATESSAA 60 KEETIHGSED YACVKTANEA HMNPEVLSAD ENDKLAASKT EKEQNDAPNS KERLKKPDKI 120 LPCPRCNSME TKFCYYNNYN VNQPRHFCKA CQRYWTEGGT IRNVPVGAGR RKNKNSASHY 180 RHITISEALR AAQIDVPIEV NHLASKGNGR VLNFSVSAPV CESMVNVLNP AERKVLNGTR 240 NEFEGAKGPC EGGETGDDCS SASSVTMSSS MENGARRFPQ EPQMQNINGC PSQIPCLPGV 300 PWPCSWTAPI PPPAFCPPGV PLSLYPATYW SCNAPGSWNI PWFTPQPCPP IPGPNSPTLG 360 KHSRDGDELQ ADNSGMENPP KQKNGSVLVP KTLRIDDPNE AAMSSIWETL GIKNDSIKAV 420 DLSNVFQSKG DQKSNVSEVL SPVLQANPAA LSRSLTFHER S

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MLEMKDSAIR IFGKKIPLPA DFEAPLMQSD DLDSSSEKEN RDGAVEKDAV VGKATESSAA  60
KEETIHGSED YACVKTANEA HMNPEVLSAD ENDKLAASKT EKEQNDAPNS KERLKKPDKI  120
LPCPRCNSME TKFCYYNNYN VNQPRHFCKA CQRYWTEGGT IRNVPVGAGR RKNKNSASHY  180
RHITISEALR AAQIDVPIEV NHLASKGNGR VLNFSVSAPV CESMVNVLNP AERKVLNGTR  240
NEFEGAKGPC EGGETGDDCS SASSVTMSSS MENGARRFPQ EPQMQNINGC PSQIPCLPGV  300
PWPCSWTAPI PPPAFCPPGV PLSLYPATYW SCNAPGSWNI PWFTPQPCPP IPGPNSPTLG  360
KHSRDGDELQ ADNSGMENPP KQKNGSVLVP KTLRIDDPNE AAMSSIWETL GIKNDSIKAV  420
DLSNVFQSKG DQKSNVSEVL SPVLQANPAA LSRSLTFHER S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-104	Dof family protein