PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933523.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NF-YC

Protein Properties

Length: 260aa MW: 28741.4 Da PI: 6.3399

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933523.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	178.2	7.9e-56	81	184	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q iek+tdfknh+lPlarikki+kadedv+misaeaPvl+++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdfl XP_022933523.1 81 QLQTFWANQyqeIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFL 175 89****99999****************************************************************************** PP NF-YC 93 vdivprdel 101 vdivpr++l XP_022933523.1 176 VDIVPREDL 184 ****987 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MDQQGHGQPQ SMGAVGSGGQ IAYGSNLYHP GQITVGSTSG SVVTSVGGIQ STSQPGGAQL 60 GQHQLAYQHI HQQQQQQLQQ QLQTFWANQY QEIEKVTDFK NHSLPLARIK KIMKADEDVR 120 MISAEAPVLF ARACEMFILE LTLRSWNHTE ENKRRTLQKN DIAAAITRTD IFDFLVDIVP 180 REDLKDEVLT SIPRGSITVG GPGDALPYCY MPSQHAPQVG APGMIMGKPV MDPAIYAQQS 240 HPYMPPQMWQ HTQDQAPPDQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	160	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	2e-82	NF-YC family protein