PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022933505.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 311aa    MW: 34776.1 Da    PI: 8.6998
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022933505.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP83.55.3e-2650133385
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.seceaesssssasns 85 
                     g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+L + ++sk i+WLl   k  i++l+ ++ ++  s + +++   + +++
  XP_022933505.1  50 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGlSPFHQHMLFPQYHHN 133
                     79************************************************************9554442222333333333333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MLRSSKEKGF GGKEEGISDE KYDMAKGSTR SRQWSGFRNP RIVRVSRSFG GKDRHSKVCT  60
IRGLRDRRIR LSVPTAIQLY DLQDKLKLGQ PSKVIDWLLD VTKLDIDKLP PLQIPTGLSP  120
FHQHMLFPQY HHNSSTLPLP LPTPPPFAFD MKDPSMMHIR DVVNQTTMIE KSKSKGKWID  180
GGNDQEVEDY NEQIMMNNCN AYNYNTCDHD HQHSCGVFPS QIEAQTSSSS CSSLVFTPYA  240
SYITNPFESH IHFLSSNSHT LSNPFIPSSL HPFASQNLKP FPPNFNLKQL LHAGNNDGGG  300
SGKDGAASGS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60970.12e-46TCP family protein