PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022933458.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | YABBY | ||||||||
Protein Properties | Length: 190aa MW: 21429.4 Da PI: 7.7039 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 205.2 | 2.5e-63 | 7 | 164 | 5 | 170 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelk.veeenlksnvekeesastsvss 98 ++eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a q l+ ++ + +l + + + ++ s + ++++++ + s XP_022933458.1 7 IAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDV-QVPNY-NLYTSSGpDFQGDFGSSSKCDNNKMQIRDS 99 689***********************************************99999985.22222.222222202222333333222222222222 PP YABBY 99 eklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +++ v+rPPekrqrvPsayn+fikeei+rika+nP+ishreafs+aaknWahfP+ihfgl XP_022933458.1 100 -------ATIAAEERVVNRPPEKRQRVPSAYNQFIKEEIRRIKAKNPEISHREAFSTAAKNWAHFPRIHFGL 164 .......22233334589****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MSSCIDIAPE QLCYIPCNFC NIVLAVSVPC SSLFDIVTVR CGHCTNLWSV NMAAAFQSLS 60 WQDVQVPNYN LYTSSGPDFQ GDFGSSSKCD NNKMQIRDSA TIAAEERVVN RPPEKRQRVP 120 SAYNQFIKEE IRRIKAKNPE ISHREAFSTA AKNWAHFPRI HFGLMFETNN QVKIDDGSER 180 LMSMAALLNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 2e-84 | YABBY family protein |