PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022933456.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 543aa MW: 61514.8 Da PI: 8.2005 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 18.7 | 3.2e-06 | 86 | 106 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 +C f++ G+C+ Gd+C+F Hg XP_022933456.1 86 PCYFYFN-GFCSKGDTCTFLHG 106 7999999.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 543 aa Download sequence |
MGEEFRKRNT DCVYFLASPL TCKKGFDCEY RHSEIARLNP RDCYYWLAGN CLNAACSFRH 60 PPMDGAAGKV FESSQSSVPV NKTNIPCYFY FNGFCSKGDT CTFLHGTDIT VAARSTKIGN 120 TSSSEDKTAS SHKNGLASTD ADAFLQSSKK VVGPTIEGTF RESRSQPSAE NVSIRSACAK 180 ISLPECEKVA VDEPVSLPLT EGSKYSRSHV HVVADQSYEE PMVDSSEDEN PLESSTGFDV 240 VVGHELENLD SDDDSEYLLS TNLEQRELDT ELCRDDDEDY IAYEPMHSDL EVLYEREMHT 300 YDHLERNSIL SNDRNVISCS RGKLIKSLFT RKRKLTLMNI DSEEWNRTDL RSYLQRDGVS 360 GNGSIIGLSR RRNGMSRRTS RNFAKPWKDG LYHPTLGRRL PLHVGKVSGE SLSEDLTFSN 420 SISGYRSFRH SRQYKPYRYY DGYRFARRQH PLSNISRRPV SREPVPRDHG FNLKSSVPFK 480 GPKTLSQIKD EKRKVEENRG LSMKKRHSIG CASSSADFRG PKPLSDILKD KRKVEKLVKE 540 IIT |