PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022933456.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 543aa    MW: 61514.8 Da    PI: 8.2005
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022933456.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.73.2e-0686106526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                     +C f++  G+C+ Gd+C+F Hg
  XP_022933456.1  86 PCYFYFN-GFCSKGDTCTFLHG 106
                     7999999.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MGEEFRKRNT DCVYFLASPL TCKKGFDCEY RHSEIARLNP RDCYYWLAGN CLNAACSFRH  60
PPMDGAAGKV FESSQSSVPV NKTNIPCYFY FNGFCSKGDT CTFLHGTDIT VAARSTKIGN  120
TSSSEDKTAS SHKNGLASTD ADAFLQSSKK VVGPTIEGTF RESRSQPSAE NVSIRSACAK  180
ISLPECEKVA VDEPVSLPLT EGSKYSRSHV HVVADQSYEE PMVDSSEDEN PLESSTGFDV  240
VVGHELENLD SDDDSEYLLS TNLEQRELDT ELCRDDDEDY IAYEPMHSDL EVLYEREMHT  300
YDHLERNSIL SNDRNVISCS RGKLIKSLFT RKRKLTLMNI DSEEWNRTDL RSYLQRDGVS  360
GNGSIIGLSR RRNGMSRRTS RNFAKPWKDG LYHPTLGRRL PLHVGKVSGE SLSEDLTFSN  420
SISGYRSFRH SRQYKPYRYY DGYRFARRQH PLSNISRRPV SREPVPRDHG FNLKSSVPFK  480
GPKTLSQIKD EKRKVEENRG LSMKKRHSIG CASSSADFRG PKPLSDILKD KRKVEKLVKE  540
IIT