PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022933450.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 313aa    MW: 31704.2 Da    PI: 8.9389
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022933450.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702196.21.1e-60952604154
          DUF702   4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa...aeaaskrkrelkskkqsalsstklssae 95 
                     g  +C+dCGnqakkdC+h+RCR CCksrgfdCathvkstWvpaa+rrerq   aaa++ a+  +   +++  k++r   ++++++ s+t++s+ +
  XP_022933450.1  95 GVGTCHDCGNQAKKDCNHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQVLSAAAAAAATGGTssgSTSGGKKPRLI-ASQTTTNSHTSTSN-T 187
                     5568*********************************************99988877776655533344555555543.44444455555544.4 PP

          DUF702  96 skkeletss...........lPeevsseavfrcvrvssvdd...geeelaYqtavsigGhvfkGiLydqGlee 154
                     ++++++t s           lPe+v+++avf+cvrv++v+    g +e+aYq++v+igGhvfkG+Lyd+G+e+
  XP_022933450.1 188 PTRSFDTCSaadmsykrakkLPEQVRAPAVFKCVRVTAVEGggtGGNEYAYQAVVKIGGHVFKGYLYDHGVEA 260
                     55677777678899999999********************8544679***********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MWPSTSSTRP IAGAYGHTAP PPTDMVGLMA SGYGVGLSVL PLLTGLAPSS VGIEETNLMI  60
SRGGDGGGGG GGVQFHGNNF DGFGFLGGGS SLNSGVGTCH DCGNQAKKDC NHRRCRSCCK  120
SRGFDCATHV KSTWVPAARR RERQVLSAAA AAAATGGTSS GSTSGGKKPR LIASQTTTNS  180
HTSTSNTPTR SFDTCSAADM SYKRAKKLPE QVRAPAVFKC VRVTAVEGGG TGGNEYAYQA  240
VVKIGGHVFK GYLYDHGVEA REGFPMLSDL HLGGGGDGGS TSSPIIDPSD VYGSSAGRGG  300
GLAGSSGYGN PIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.14e-53SRS family protein