PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022933018.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GeBP

Protein Properties

Length: 392aa MW: 43784.7 Da PI: 4.5681

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022933018.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	118.2	4.6e-37	111	209	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk.spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 klfqrlw++eDei lLqG++d+++++g+ + ++ d+ fy+++k++++++++k+qlveK+rrLKkK+++ k++sgke++f+++hdq +fe+s+ XP_022933018.1 111 KLFQRLWTDEDEIELLQGFLDYTMQRGTtHHHQnDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVIGKISSGKEFNFKSPHDQATFEISR 205 579***********************633446********************************************************* PP DUF573 94 kiWg 97 kiW XP_022933018.1 206 KIWS 209 *6 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MDPRNDAVFP DEDLEDDEES LEDDDDDDEE EELNDDPSPS TSSAGAVAVP SVSAVVTVAT 60 PGTIDRPVPV VPPPSIVSIS SSDLIRQRLE TASAEPLTLQ CEKKPLDESR KLFQRLWTDE 120 DEIELLQGFL DYTMQRGTTH HHQNDTALFY DQIKSKLQLD FNKNQLVEKL RRLKKKYRNV 180 IGKISSGKEF NFKSPHDQAT FEISRKIWSN TGRIGVDDNA LDDEEPAPTP YASYMDARNE 240 EMMANFSEKK PTPIPKSRKR SRPGSGLRMD GPPRSSNENL NKEKNSTYNN NNNENVNHVG 300 VGGLIEEAVR SCLSPLFKEL LSNSMGGGGL CGSRGFSGLA LHPIPLSFGG GDMADERWRK 360 QQIMELEVYS KRLELVQEQI KTALEDLRSM GG

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MDPRNDAVFP DEDLEDDEES LEDDDDDDEE EELNDDPSPS TSSAGAVAVP SVSAVVTVAT  60
PGTIDRPVPV VPPPSIVSIS SSDLIRQRLE TASAEPLTLQ CEKKPLDESR KLFQRLWTDE  120
DEIELLQGFL DYTMQRGTTH HHQNDTALFY DQIKSKLQLD FNKNQLVEKL RRLKKKYRNV  180
IGKISSGKEF NFKSPHDQAT FEISRKIWSN TGRIGVDDNA LDDEEPAPTP YASYMDARNE  240
EMMANFSEKK PTPIPKSRKR SRPGSGLRMD GPPRSSNENL NKEKNSTYNN NNNENVNHVG  300
VGGLIEEAVR SCLSPLFKEL LSNSMGGGGL CGSRGFSGLA LHPIPLSFGG GDMADERWRK  360
QQIMELEVYS KRLELVQEQI KTALEDLRSM GG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	1e-76	GeBP family protein