PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022932846.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | bHLH | ||||||||
Protein Properties | Length: 237aa MW: 26895.9 Da PI: 8.4259 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.8 | 3.3e-12 | 46 | 88 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 Er+RR+++N++++ Lr ++P+ + K++Ka+i + A+++I++L XP_022932846.1 46 VSERNRRRKLNDRLFALRAVVPNiS------KMDKASIIKDAIDHIQKL 88 57*********************66......****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MNYLENGVFM PEDLGSWGLD DLVPSYYDSS SPEGVLSPSA ASKNIVSERN RRRKLNDRLF 60 ALRAVVPNIS KMDKASIIKD AIDHIQKLRE QERRIETEIY ELESGKSKKK ITRYEFEQEV 120 PLLHTPKRNK TEQFSYYDSS ATRFSPIEVL DLSVTYMGER TIVVSLTCCK RADSMVKLCK 180 VFESLKLKII TANITAVSGR LLKTVFIEAG QEERDLLKIK IETALAGLND PQSPVSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 2e-78 | bHLH family protein |