PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022932719.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | FAR1 | ||||||||
Protein Properties | Length: 256aa MW: 29461.2 Da PI: 6.3202 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 84.6 | 1.6e-26 | 75 | 165 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +Y+++vGF+vr++++++s+ n++++ ++fvCskeg+r+++ +++++ + tr gC+a++++ +++ gkw vtk++++HnH l XP_022932719.1 75 EFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVSRKDR-IlpAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLL 165 6******************************************99883322.2447899******************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MDCQSNHTFD SDESDIDIQA EIYEKGGSID DIHKDLDFCL REDDKVAEQS VVDLPMDGAE 60 PYIGMEFGSR DEAREFYVNY GRRVGFTVRI HHNRRSRVNN QVIGQDFVCS KEGFRAKKYV 120 SRKDRILPAP PITREGCQAM IRLALRDGGK WAVTKFVKDH NHLLLSPSKV PWRGSGKNLL 180 TEDEKDKRIR ELSLELYNEK QKCKRKCAAY EEQLKAVLKE LEMHTECISN KVAEVVKSIR 240 EVEDEEHSGG LNQGWV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 6e-42 | FAR1 family protein |