PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932538.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 506aa MW: 56381.4 Da PI: 5.9852

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932538.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	23.1	1.9e-07	257	278	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 Cp+Cgk F+r nL+ H+r H XP_022932538.1 257 FCPICGKGFKRDANLRMHMRGH 278 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MEPENRLCSS EVWAKSSSFP NINVQQPSQK WVDPSILDYD MEQPFQEFEE RIESKASLTC 60 SPNQRIEILD KDSNELNAGL LASKIQDWDP RAMLNNLSFL EQKIHQLQEL VHLIVGRRNQ 120 ALGSPDELVV QQQQLITADL TSIIVQLIST AGSLLPSVKH KLSAAVPPVG QLEQLEQLDR 180 VLFASGPRTN SGDGTKLPEL PTQVEENSKC GKEQNMAVEE NESKDEEDAD EHENLPPGSY 240 EILQLEKEEI LAPHTHFCPI CGKGFKRDAN LRMHMRGHGD EYKTAAALAK PNKESSSETM 300 LIKRYSCPFT GCKRNKDHKK FQPLKTILCV KNHYKRTHCD KSFTCSKCNS KKFSVIADLK 360 THEKHCGKDK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LDESKGAAVS FDRGERSDKL 420 RSLNFSFGSI ATGGSSVETI ADAKAGVDDP LGCFSPLNFE SCNFEGFHEF PRPPFENVDN 480 VFSFLSPGSG NYTEKSGAES SSNNLE

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MEPENRLCSS EVWAKSSSFP NINVQQPSQK WVDPSILDYD MEQPFQEFEE RIESKASLTC  60
SPNQRIEILD KDSNELNAGL LASKIQDWDP RAMLNNLSFL EQKIHQLQEL VHLIVGRRNQ  120
ALGSPDELVV QQQQLITADL TSIIVQLIST AGSLLPSVKH KLSAAVPPVG QLEQLEQLDR  180
VLFASGPRTN SGDGTKLPEL PTQVEENSKC GKEQNMAVEE NESKDEEDAD EHENLPPGSY  240
EILQLEKEEI LAPHTHFCPI CGKGFKRDAN LRMHMRGHGD EYKTAAALAK PNKESSSETM  300
LIKRYSCPFT GCKRNKDHKK FQPLKTILCV KNHYKRTHCD KSFTCSKCNS KKFSVIADLK  360
THEKHCGKDK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LDESKGAAVS FDRGERSDKL  420
RSLNFSFGSI ATGGSSVETI ADAKAGVDDP LGCFSPLNFE SCNFEGFHEF PRPPFENVDN  480
VFSFLSPGSG NYTEKSGAES SSNNLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein