PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022932488.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Whirly | ||||||||
Protein Properties | Length: 239aa MW: 26667.6 Da PI: 10.1446 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 176.1 | 7.3e-55 | 63 | 198 | 2 | 137 |
Whirly 2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkv 96 vyk+ka +++ + +ptf++l+sg+l+++r+G++ll++ +a++erkydW kkq f+l +tev++l++l++++sceffhdp++ +s +G+vrk+l++ XP_022932488.1 63 VYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSI 157 9********************************************************************************************** PP Whirly 97 ePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137 + ++dG G+f++l+v n+ + ++e +svP + +ef+v++++ XP_022932488.1 158 KAHADGNGYFISLNVVNNTQSTKEFLSVPFTAGEFSVMKTA 198 ******************9********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MLKLQRWFSR NQLFEQVVCK KAGHVDHAFG SHPFSSGVGI PGQKFTNTVP KNENDRVYAA 60 YNVYKGKAGV SMFPCLPTFT KLESGSLVID RRGSILLTFF PAIGERKYDW TKKQFFSLNP 120 TEVGTLISLG PRDSCEFFHD PGMLSSTAGQ VRKSLSIKAH ADGNGYFISL NVVNNTQSTK 180 EFLSVPFTAG EFSVMKTACS FALPHILGWD RLTKPSLGME KGFQPNKVNR EGLSLEWKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 2e-78 | Whirly family protein |