PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022932403.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRF | ||||||||
Protein Properties | Length: 325aa MW: 37137.4 Da PI: 9.1474 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 77.8 | 1.1e-24 | 76 | 119 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk+++ XP_022932403.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVD 119 79***************************************986 PP | |||||||
2 | QLQ | 58.6 | 1.8e-20 | 8 | 43 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT aQ+q+L++Q+l++Ky++++ P+Pp+Ll+ i++ XP_022932403.1 8 PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKR 43 8*******************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MCTRSMFPFT SAQWQELEHQ ALIFKYMVSG IPIPPDLLFS IKRSTLDSPF TSKLFPHHPQ 60 HVGWNYLQMS LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVDV 120 LKTTATNDIN RLSNPAFSSL TNNSSLLSYR PFPAHQISST SNGNGISPQD TNTLLLLESG 180 SYSDRNPDYR RSRDTYGLKE KVDEYAFFSQ EPSETAARAD SLQLTPLTMS CSSLYPKQNN 240 CSSLQNDQSC YQPHQSLTDP LKQQKRDESQ KTVHRFFDEW PPKERGSRLD FEDKSSNTGS 300 VSTIRPSTSI PTTSNDFPIF GFNNP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 2e-55 | GRF family protein |