PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022932360.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | GRAS | ||||||||
Protein Properties | Length: 544aa MW: 60388.2 Da PI: 5.7242 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 427.3 | 1.2e-130 | 175 | 543 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 +e L +cA+a+ ++++ ++l+++l+ ++s +g+p+qRl ay++eAL ar a+s+++++kal+++e +e l+++++++e++P++kf++l XP_022932360.1 175 KEMLCACARAIGENNMLTGEWLVSELRGMVSVSGEPIQRLGAYLLEALIARTASSGNSICKALRCKEPI---GTEMLSYMHILYEICPYFKFGYL 266 789*****************************************************************9...9********************** PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189 aN aI ea++ge+rvHiiDf+i qG QW++L+qaLa+Rp+gpp++ iTg+++++s + le +g+rL+ +Ae+l vpfef+ +a + +++ XP_022932360.1 267 SANGAIAEAIKGENRVHIIDFQIAQGNQWITLMQALANRPGGPPKVTITGIDDSASAfaRGGGLEIVGKRLSLLAESLMVPFEFRG-IAGSADEI 360 *****************************************************88889999*************************.699***** PP GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284 + e+L+v+pgEa+aV++ l lh+++desv ++++rd++L+lvkslsPkvv+vve+e++ n+++F rfl++l+yy+a+f+s++++lpr+++eri+ XP_022932360.1 361 QREDLKVQPGEAIAVSFTLVLHHMPDESVGSQNHRDRILRLVKSLSPKVVTVVEHESNNNTAPFYSRFLQTLKYYTAIFESIDVTLPRDHKERIN 455 *********************************************************************************************** PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 vE+++l+r+ivn+vacegaer+erhe l+kWr+r+ +aGFkp pls ++++++++ll+++++ y++ee++g+l+lgW +++Lv+ SaW XP_022932360.1 456 VEQHCLARDIVNIVACEGAERVERHELLGKWRSRFLMAGFKPHPLSPFVNATIEALLKNYSD-KYTLEERDGALYLGWLNQNLVTSSAW 543 *************************************************************5.5************************* PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 544 aa Download sequence |
MQESSRKKLP NQSHRFYEQP PQEPGSCYWP PMNHGGGLYS DDVFEQNHLP SEAFKQYCNL 60 ESSSGTSGYP PQNSSSTASF TSNGSPSSHQ ECHSYSLDPY YSPDNNCGSP VSRSCLTDDA 120 ADDLRHKIRE LETAMLGPDT DGFDIYSVAN PVDPVLPVQA GWKDVAEIMS RKDLKEMLCA 180 CARAIGENNM LTGEWLVSEL RGMVSVSGEP IQRLGAYLLE ALIARTASSG NSICKALRCK 240 EPIGTEMLSY MHILYEICPY FKFGYLSANG AIAEAIKGEN RVHIIDFQIA QGNQWITLMQ 300 ALANRPGGPP KVTITGIDDS ASAFARGGGL EIVGKRLSLL AESLMVPFEF RGIAGSADEI 360 QREDLKVQPG EAIAVSFTLV LHHMPDESVG SQNHRDRILR LVKSLSPKVV TVVEHESNNN 420 TAPFYSRFLQ TLKYYTAIFE SIDVTLPRDH KERINVEQHC LARDIVNIVA CEGAERVERH 480 ELLGKWRSRF LMAGFKPHPL SPFVNATIEA LLKNYSDKYT LEERDGALYL GWLNQNLVTS 540 SAWI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |