PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022932295.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 280aa MW: 31793.7 Da PI: 5.6721

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022932295.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.5	1.6e-50	8	132	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv +yL++k+++ ++++ vi+e+d+yk++Pw Lp+ + ++ekewyfFs+rd+ky++g+r+nr++ +gyWkatg dk++ + XP_022932295.1 8 LPPGFRFHPTDEELVLHYLCRKCSSLPVPA-PVIAEIDLYKYDPWLLPELAVSGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPIGR- 100 79************************99.89***********77778899********************************98. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ g+kk Lvfy g+ap+g+kt+W+mheyrl XP_022932295.1 101 -PKTLGIKKALVFYAGKAPRGVKTNWIMHEYRL 132 .778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MSVAGVQLPP GFRFHPTDEE LVLHYLCRKC SSLPVPAPVI AEIDLYKYDP WLLPELAVSG 60 EKEWYFFSPR DRKYPNGSRP NRSAGTGYWK ATGADKPIGR PKTLGIKKAL VFYAGKAPRG 120 VKTNWIMHEY RLANVDRSAA NKTHNLRLDE WVLCRIYNKK GCIEKHYQST DDFEEEDEKP 180 NISATMPNNN MVQMDTSYSV PIMHTDSSSG SDQATSPEVT WDKEVQSRPK SGGGGDIDFF 240 EFSYIDSLSA EDNPFGTQVQ FQMDNLSPLQ DTFSYLQWQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-113	NAC family protein