PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022932032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 336aa MW: 39055.4 Da PI: 6.9829 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 55 | 1e-17 | 11 | 52 | 3 | 44 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44 i n+ r++tf kR++ +l KA+ELS+LCd++++v +++++ XP_022932032.1 11 IGNEKSRKTTFLKRKKSLLRKAYELSTLCDVRACVFVYGPNH 52 78999**********************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MGRGKLSMQL IGNEKSRKTT FLKRKKSLLR KAYELSTLCD VRACVFVYGP NHNDQSPVEL 60 NTWPPCREEV NNMIASYKAN CLHKRARKAF DLLDFFSERK KKLENDMSKL RKDVLEARFP 120 KWDERLDHLT EDQLRILMVK LDSKLDTMKR RIEIVTENHE EGTSGENNQT LIANMKPEQV 180 MSYGEQSYEM FGNPSMETRP MMPFHHQYHQ QLQTMAQNRQ MDHELENLSQ ILFGSNGSTA 240 QIESNYGNNC FQNPNFYTDP TNGMVMDNTQ GYSMCHYGVP RATQSVLPVS YMPLIDDQMM 300 MACALNTQMG LANTSAQVND QFDCFNYEYF MKPNNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G55690.1 | 4e-22 | M-type_MADS family protein |