PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022931833.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 446aa MW: 49722.7 Da PI: 6.7995

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022931833.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.5e-09	281	318	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gL+ +qV++WF N R + XP_022931833.1 281 FEHflHPYPTDTDKLMLASQTGLSRSQVSNWFINARVR 318 564459******************************88 PP
2	BELL	87.1	1.9e-28	161	229	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + ++kk++L+++l+eV+krYk y++q+q+v+ Fe +aglg+a+pY +lA a+ +hF+ Lk+ ia+q+ XP_022931833.1 161 DSRRKKSRLVTMLDEVYKRYKLYYQQMQAVVTTFEYAAGLGNAAPYMNLAVTAMFKHFKFLKNTIADQL 229 6789**************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MAEEGFEVYH VPHQSCRDKL RVGIANNNHN SHIAAALLPL CHPPSLISSH FDSHPLPQNP 60 SFHYPPPPPP PPTAADVPPL LPDQPLSLDL NLQQRYASAL PFVGYSASLL KASKFLKPAQ 120 QLLHDLFDSP PDPLLLDPLL ESLAGDIPDP ITSTDDDGGA DSRRKKSRLV TMLDEVYKRY 180 KLYYQQMQAV VTTFEYAAGL GNAAPYMNLA VTAMFKHFKF LKNTIADQLQ FNKKNQQPYN 240 PYCQTSIHNN NNAPFVDHQP VWRPQRGLPE SAVTVLRAWL FEHFLHPYPT DTDKLMLASQ 300 TGLSRSQVSN WFINARVRLW KPMVEEIHML ETRQARKSHQ NNDDNDNNND HISTHNGNNN 360 NASSSHHDHN QLNLSNSNFI PTHHPHVAAG AAHMGGGAGG GNVSLTLGLH QNYGGITLTE 420 PFPINAAQHF NFGLEGNGEG FVNEWF

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MAEEGFEVYH VPHQSCRDKL RVGIANNNHN SHIAAALLPL CHPPSLISSH FDSHPLPQNP  60
SFHYPPPPPP PPTAADVPPL LPDQPLSLDL NLQQRYASAL PFVGYSASLL KASKFLKPAQ  120
QLLHDLFDSP PDPLLLDPLL ESLAGDIPDP ITSTDDDGGA DSRRKKSRLV TMLDEVYKRY  180
KLYYQQMQAV VTTFEYAAGL GNAAPYMNLA VTAMFKHFKF LKNTIADQLQ FNKKNQQPYN  240
PYCQTSIHNN NNAPFVDHQP VWRPQRGLPE SAVTVLRAWL FEHFLHPYPT DTDKLMLASQ  300
TGLSRSQVSN WFINARVRLW KPMVEEIHML ETRQARKSHQ NNDDNDNNND HISTHNGNNN  360
NASSSHHDHN QLNLSNSNFI PTHHPHVAAG AAHMGGGAGG GNVSLTLGLH QNYGGITLTE  420
PFPINAAQHF NFGLEGNGEG FVNEWF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	8e-74	TALE family protein