PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022931617.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 148aa MW: 16862.8 Da PI: 7.9038 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 33.6 | 6.6e-11 | 55 | 78 | 3 | 26 |
S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHg 26 t+lC++f+ tG+C+yGd+C++ H+ XP_022931617.1 55 TRLCNRFLTTGFCQYGDSCNYFHS 78 9********************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence |
MPLGKYYCDY CEKQFQDTPF ARKRHLQSLS HHKAKALWFD SFRDSNQPLS HAFPTRLCNR 60 FLTTGFCQYG DSCNYFHSNN NPQYSSSHPI AGFPENNQAP NIPVNQFMEG SSLTGSLDRL 120 RTSWGNLPPS LMPPPEGGYP PLPFVDWG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26749.1 | 9e-33 | C3H family protein |