PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022931547.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

DBB

Protein Properties

Length: 296aa MW: 32320.3 Da PI: 5.3462

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022931547.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22	3.5e-07	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C +++H H++vpl XP_022931547.1 4 QCNVCEMAEATVLCCADEAALCWACDEKIHAAnklaskHQRVPL 47 7****99*******************66899999999986 PP
2	zf-B_box	29.4	1.6e-09	52	94	1	37
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 s+++kC+ ++e +fC +++ llC++C +++H H XP_022931547.1 52 SQMPKCDICQEASGYIFCLEDRALLCRKCDVAIHTAntyvtgH 94 689*******************************654455555 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MKIQCNVCEM AEATVLCCAD EAALCWACDE KIHAANKLAS KHQRVPLSDS SSQMPKCDIC 60 QEASGYIFCL EDRALLCRKC DVAIHTANTY VTGHQRFLLT GVKVALEPTD PVPCSSMPKS 120 HSQVKPTETK VRPLSEREFS LPSPGELSRC LSVQGGSEDF MANGTFHTGD AVSGGFSQWQ 180 MDDLINLTGF NQNYGFLDNG SSKADSGKLG DSDSSPVLRA ADIELDDNDE CSGQVPEASW 240 TVPQIPSPPT ASGLYWPRSY HNSMDGAVFV PDISCSSEKV QHCSHNGRFL KRRRQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	8e-96	DBB family protein